Broad-sense heritability of a pathogen trait
R2adj(epidemic = NULL, data = NULL, GEValues = NULL, sampledOnly = TRUE, activeOnly = FALSE, tMin = 0, tMax = Inf, firstN = Inf, lastN = Inf)
| epidemic | a list of objects returned from simulateEpidemic (see toyepidemic package) |
|---|---|
| data | NULL or a data.table such as the element gen in an epidemic list |
| GEValues | genotype-environment trait values for calculating the z-values; if NULL it is assumed that the z-values are already in data, or epidemic$gen. |
| sampledOnly, activeOnly, tMin, tMax, firstN, lastN | parameters passed to extractPop |
numeric indicating the estimated heritability for infected individuals in the population.