Constructor for class OrderedTree.

OrderedTree(std::vector<NodeType> const& branch_start_nodes, std::vector<NodeType> const& branch_end_nodes, std::vector<LengthType> const& branch_lengths);

Constructs the tree object given a list of branches. The list of branches is specified from the corresponding elements in the three vectors passed as arguments. Creates the internal data-objects needed for ordered traversal of the nodes in the tree.

Arguments

branch_start_nodes	std::vector<NodeType> const&: starting node for every branch in the tree.
branch_end_nodes	std::vector<NodeType> const&: ending node for every branch in the tree; must be the same length as branch_start_nodes.
branch_lengths	std::vector<LengthType> const&: lengths associated with the branches. Pass an empty vector for branch_lengths for a tree without branch lengths (i.e. only a topology).

See also

OrderedTree Tree Tree::Tree()

SPLITT

Other public methods in SPLITT::OrderedTree: SPLITT::OrderedTree::RangeIdPruneNode, SPLITT::OrderedTree::RangeIdVisitNode, SPLITT::OrderedTree::num_levels, SPLITT::OrderedTree::num_parallel_ranges_prune, SPLITT::OrderedTree::ranges_id_prune, SPLITT::OrderedTree::ranges_id_visit